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Cluster: HRGMv2_1569_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1569_10 HRGMv2_1569_10_6 4370 5770 + GH1
TC HRGMv2_1569_10 HRGMv2_1569_10_7 5891 7243 + 4.A.3.2.2
TC HRGMv2_1569_10 HRGMv2_1569_10_8 7397 7699 + 4.A.3.2.9
TC HRGMv2_1569_10 HRGMv2_1569_10_9 7709 8041 + 4.A.3.2.3
STP HRGMv2_1569_10 HRGMv2_1569_10_10 8281 9234 + Glucokinase
pfam HRGMv2_1569_10 HRGMv2_1569_10_11 9394 10317 + DHH | DHHA2
TC HRGMv2_1569_10 HRGMv2_1569_10_12 10585 11943 + 2.A.33.1.1
Gene ID: HRGMv2_1569_10_6
Type: CAZyme
Location: 4370 - 5770 (+)
Gene ID: HRGMv2_1569_10_7
Type: TC
Location: 5891 - 7243 (+)
Gene ID: HRGMv2_1569_10_8
Type: TC
Location: 7397 - 7699 (+)
Gene ID: HRGMv2_1569_10_9
Type: TC
Location: 7709 - 8041 (+)
Gene ID: HRGMv2_1569_10_10
Type: STP
Location: 8281 - 9234 (+)
Gene ID: HRGMv2_1569_10_11
Type: pfam
Location: 9394 - 10317 (+)
Gene ID: HRGMv2_1569_10_12
Type: TC
Location: 10585 - 11943 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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