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Cluster: HRGMv2_1569_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1569_45 HRGMv2_1569_45_1 116 454 - 4.A.3.1.2
TF HRGMv2_1569_45 HRGMv2_1569_45_2 669 1703 - LacI
TC HRGMv2_1569_45 HRGMv2_1569_45_3 2030 3805 + 4.A.3.1.1
CAZyme HRGMv2_1569_45 HRGMv2_1569_45_4 3872 5311 + GH1
TF HRGMv2_1569_45 HRGMv2_1569_45_5 5586 6596 - LacI
TC HRGMv2_1569_45 HRGMv2_1569_45_6 6872 8650 + 4.A.3.1.1
CAZyme HRGMv2_1569_45 HRGMv2_1569_45_7 8726 10147 + GH1
Gene ID: HRGMv2_1569_45_1
Type: TC
Location: 116 - 454 (-)
Gene ID: HRGMv2_1569_45_2
Type: TF
Location: 669 - 1703 (-)
Gene ID: HRGMv2_1569_45_3
Type: TC
Location: 2030 - 3805 (+)
Gene ID: HRGMv2_1569_45_4
Type: CAZyme
Location: 3872 - 5311 (+)
Gene ID: HRGMv2_1569_45_5
Type: TF
Location: 5586 - 6596 (-)
Gene ID: HRGMv2_1569_45_6
Type: TC
Location: 6872 - 8650 (+)
Gene ID: HRGMv2_1569_45_7
Type: CAZyme
Location: 8726 - 10147 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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