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Cluster: HRGMv2_1567_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1567_10 HRGMv2_1567_10_1 29 1405 - 2.A.33.1.1
pfam HRGMv2_1567_10 HRGMv2_1567_10_2 1673 2596 - DHH | DHHA2
STP HRGMv2_1567_10 HRGMv2_1567_10_3 2762 3715 - Glucokinase
TC HRGMv2_1567_10 HRGMv2_1567_10_4 3957 4289 - 4.A.3.2.3
TC HRGMv2_1567_10 HRGMv2_1567_10_5 4299 4601 - 4.A.3.2.9
TC HRGMv2_1567_10 HRGMv2_1567_10_6 4755 6107 - 4.A.3.2.2
CAZyme HRGMv2_1567_10 HRGMv2_1567_10_7 6228 7628 - GH1
Gene ID: HRGMv2_1567_10_1
Type: TC
Location: 29 - 1405 (-)
Gene ID: HRGMv2_1567_10_2
Type: pfam
Location: 1673 - 2596 (-)
Gene ID: HRGMv2_1567_10_3
Type: STP
Location: 2762 - 3715 (-)
Gene ID: HRGMv2_1567_10_4
Type: TC
Location: 3957 - 4289 (-)
Gene ID: HRGMv2_1567_10_5
Type: TC
Location: 4299 - 4601 (-)
Gene ID: HRGMv2_1567_10_6
Type: TC
Location: 4755 - 6107 (-)
Gene ID: HRGMv2_1567_10_7
Type: CAZyme
Location: 6228 - 7628 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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