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Cluster: HRGMv2_1567_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1567_32 HRGMv2_1567_32_4 2051 3427 - GH13_20
TC HRGMv2_1567_32 HRGMv2_1567_32_5 3775 4971 - 2.A.1.2.18
TC HRGMv2_1567_32 HRGMv2_1567_32_6 5094 7454 - 9.A.8.1.6
NULL(UNKNOWN) HRGMv2_1567_32 HRGMv2_1567_32_7 7576 7896 - NULL(UNKNOWN)
[View Structural Homologs]
peptidase HRGMv2_1567_32 HRGMv2_1567_32_8 7944 8843 - S09.UPW
TC HRGMv2_1567_32 HRGMv2_1567_32_9 9090 9653 + 4.A.1.2.6
pfam HRGMv2_1567_32 HRGMv2_1567_32_10 9835 11238 + tRNA-synt_2 | tRNA_anti-codon
NULL(UNKNOWN) HRGMv2_1567_32 HRGMv2_1567_32_11 11488 12273 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1567_32 HRGMv2_1567_32_12 12434 13414 + 3.A.1.34.1
TC HRGMv2_1567_32 HRGMv2_1567_32_13 13619 14542 + 3.A.1.34.1
TC HRGMv2_1567_32 HRGMv2_1567_32_14 14535 15329 + 3.A.1.34.1
TC HRGMv2_1567_32 HRGMv2_1567_32_15 15477 16244 + 1.A.23.4.2
pfam HRGMv2_1567_32 HRGMv2_1567_32_16 16339 18255 + Bmp
pfam HRGMv2_1567_32 HRGMv2_1567_32_17 18252 18962 + Metallophos | Metallophos_2
TC HRGMv2_1567_32 HRGMv2_1567_32_18 19088 19795 - 1.C.82.1.1
Gene ID: HRGMv2_1567_32_4
Type: CAZyme
Location: 2051 - 3427 (-)
Gene ID: HRGMv2_1567_32_5
Type: TC
Location: 3775 - 4971 (-)
Gene ID: HRGMv2_1567_32_6
Type: TC
Location: 5094 - 7454 (-)
Gene ID: HRGMv2_1567_32_7
Type:
Location: 7576 - 7896 (-)
Gene ID: HRGMv2_1567_32_8
Type: peptidase
Location: 7944 - 8843 (-)
Gene ID: HRGMv2_1567_32_9
Type: TC
Location: 9090 - 9653 (+)
Gene ID: HRGMv2_1567_32_10
Type: pfam
Location: 9835 - 11238 (+)
Gene ID: HRGMv2_1567_32_11
Type:
Location: 11488 - 12273 (+)
Gene ID: HRGMv2_1567_32_12
Type: TC
Location: 12434 - 13414 (+)
Gene ID: HRGMv2_1567_32_13
Type: TC
Location: 13619 - 14542 (+)
Gene ID: HRGMv2_1567_32_14
Type: TC
Location: 14535 - 15329 (+)
Gene ID: HRGMv2_1567_32_15
Type: TC
Location: 15477 - 16244 (+)
Gene ID: HRGMv2_1567_32_16
Type: pfam
Location: 16339 - 18255 (+)
Gene ID: HRGMv2_1567_32_17
Type: pfam
Location: 18252 - 18962 (+)
Gene ID: HRGMv2_1567_32_18
Type: TC
Location: 19088 - 19795 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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