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Cluster: HRGMv2_1567_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1567_31 HRGMv2_1567_31_3 2847 5297 - 4.A.1.1.8
NULL(UNKNOWN) HRGMv2_1567_31 HRGMv2_1567_31_4 5319 5438 + NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_1567_31 HRGMv2_1567_31_5 5522 6241 + GntR
TC HRGMv2_1567_31 HRGMv2_1567_31_6 6548 7864 + 3.A.1.1.45
TC HRGMv2_1567_31 HRGMv2_1567_31_7 7952 8806 + 3.A.1.1.45
TC HRGMv2_1567_31 HRGMv2_1567_31_8 8806 9645 + 3.A.1.1.45
TC HRGMv2_1567_31 HRGMv2_1567_31_9 9714 10913 + 3.A.1.1.22
CAZyme HRGMv2_1567_31 HRGMv2_1567_31_10 11370 13637 - GT35
CAZyme HRGMv2_1567_31 HRGMv2_1567_31_11 13766 15271 - GH77
Gene ID: HRGMv2_1567_31_3
Type: TC
Location: 2847 - 5297 (-)
Gene ID: HRGMv2_1567_31_4
Type:
Location: 5319 - 5438 (+)
Gene ID: HRGMv2_1567_31_5
Type: TF
Location: 5522 - 6241 (+)
Gene ID: HRGMv2_1567_31_6
Type: TC
Location: 6548 - 7864 (+)
Gene ID: HRGMv2_1567_31_7
Type: TC
Location: 7952 - 8806 (+)
Gene ID: HRGMv2_1567_31_8
Type: TC
Location: 8806 - 9645 (+)
Gene ID: HRGMv2_1567_31_9
Type: TC
Location: 9714 - 10913 (+)
Gene ID: HRGMv2_1567_31_10
Type: CAZyme
Location: 11370 - 13637 (-)
Gene ID: HRGMv2_1567_31_11
Type: CAZyme
Location: 13766 - 15271 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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