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Cluster: HRGMv2_1565_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1565_24 HRGMv2_1565_24_13 14766 15830 - 9.B.183.1.6
CAZyme HRGMv2_1565_24 HRGMv2_1565_24_14 15827 16681 - GT2
CAZyme HRGMv2_1565_24 HRGMv2_1565_24_15 16681 17832 - GT2
NULL(UNKNOWN) HRGMv2_1565_24 HRGMv2_1565_24_16 17795 18208 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_1565_24 HRGMv2_1565_24_17 18205 19320 - GT4
pfam HRGMv2_1565_24 HRGMv2_1565_24_18 19322 20332 - ATP-grasp_3 | ATPgrasp_Ter | PylC-like_N
TC HRGMv2_1565_24 HRGMv2_1565_24_19 20325 20990 - 9.B.18.1.2
STP HRGMv2_1565_24 HRGMv2_1565_24_20 20983 22236 - Aminotran_1_2
TC HRGMv2_1565_24 HRGMv2_1565_24_21 22252 24132 - 9.B.18.2.1
Gene ID: HRGMv2_1565_24_13
Type: TC
Location: 14766 - 15830 (-)
Gene ID: HRGMv2_1565_24_14
Type: CAZyme
Location: 15827 - 16681 (-)
Gene ID: HRGMv2_1565_24_15
Type: CAZyme
Location: 16681 - 17832 (-)
Gene ID: HRGMv2_1565_24_16
Type:
Location: 17795 - 18208 (-)
Gene ID: HRGMv2_1565_24_17
Type: CAZyme
Location: 18205 - 19320 (-)
Gene ID: HRGMv2_1565_24_18
Type: pfam
Location: 19322 - 20332 (-)
Gene ID: HRGMv2_1565_24_19
Type: TC
Location: 20325 - 20990 (-)
Gene ID: HRGMv2_1565_24_20
Type: STP
Location: 20983 - 22236 (-)
Gene ID: HRGMv2_1565_24_21
Type: TC
Location: 22252 - 24132 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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