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Cluster: HRGMv2_1565_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1565_14 HRGMv2_1565_14_30 32873 33757 - CE7
TC HRGMv2_1565_14 HRGMv2_1565_14_31 33931 34758 - 3.A.1.5.27
TC HRGMv2_1565_14 HRGMv2_1565_14_32 34759 36774 - 3.A.1.5.25
TC HRGMv2_1565_14 HRGMv2_1565_14_33 36778 37734 - 3.A.1.5.38
TC HRGMv2_1565_14 HRGMv2_1565_14_34 37892 39505 - 3.A.1.5.27
pfam HRGMv2_1565_14 HRGMv2_1565_14_35 39871 41811 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1565_14 HRGMv2_1565_14_36 41818 43500 - 2.A.66.4.4
Gene ID: HRGMv2_1565_14_30
Type: CAZyme
Location: 32873 - 33757 (-)
Gene ID: HRGMv2_1565_14_31
Type: TC
Location: 33931 - 34758 (-)
Gene ID: HRGMv2_1565_14_32
Type: TC
Location: 34759 - 36774 (-)
Gene ID: HRGMv2_1565_14_33
Type: TC
Location: 36778 - 37734 (-)
Gene ID: HRGMv2_1565_14_34
Type: TC
Location: 37892 - 39505 (-)
Gene ID: HRGMv2_1565_14_35
Type: pfam
Location: 39871 - 41811 (-)
Gene ID: HRGMv2_1565_14_36
Type: TC
Location: 41818 - 43500 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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