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Cluster: HRGMv2_1565_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1565_5 HRGMv2_1565_5_47 55929 56723 - 3.A.1.34.1
TC HRGMv2_1565_5 HRGMv2_1565_5_48 56716 57639 - 3.A.1.34.1
TC HRGMv2_1565_5 HRGMv2_1565_5_49 57843 58823 - 3.A.1.34.1
NULL(UNKNOWN) HRGMv2_1565_5 HRGMv2_1565_5_50 58984 59769 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_1565_5 HRGMv2_1565_5_51 60019 61422 - tRNA-synt_2 | tRNA_anti-codon
TC HRGMv2_1565_5 HRGMv2_1565_5_52 61604 62167 - 4.A.1.2.6
peptidase HRGMv2_1565_5 HRGMv2_1565_5_53 62411 63313 + S09.UPW
TC HRGMv2_1565_5 HRGMv2_1565_5_54 63649 66009 + 9.A.8.1.6
TC HRGMv2_1565_5 HRGMv2_1565_5_55 66130 67326 + 2.A.1.2.18
CAZyme HRGMv2_1565_5 HRGMv2_1565_5_56 67481 68857 + GH13_20
Gene ID: HRGMv2_1565_5_47
Type: TC
Location: 55929 - 56723 (-)
Gene ID: HRGMv2_1565_5_48
Type: TC
Location: 56716 - 57639 (-)
Gene ID: HRGMv2_1565_5_49
Type: TC
Location: 57843 - 58823 (-)
Gene ID: HRGMv2_1565_5_50
Type:
Location: 58984 - 59769 (-)
Gene ID: HRGMv2_1565_5_51
Type: pfam
Location: 60019 - 61422 (-)
Gene ID: HRGMv2_1565_5_52
Type: TC
Location: 61604 - 62167 (-)
Gene ID: HRGMv2_1565_5_53
Type: peptidase
Location: 62411 - 63313 (+)
Gene ID: HRGMv2_1565_5_54
Type: TC
Location: 63649 - 66009 (+)
Gene ID: HRGMv2_1565_5_55
Type: TC
Location: 66130 - 67326 (+)
Gene ID: HRGMv2_1565_5_56
Type: CAZyme
Location: 67481 - 68857 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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