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Cluster: HRGMv2_1563_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1563_47 HRGMv2_1563_47_3 972 1898 - CE7
TC HRGMv2_1563_47 HRGMv2_1563_47_4 2030 2857 - 3.A.1.5.27
TC HRGMv2_1563_47 HRGMv2_1563_47_5 2858 4873 - 3.A.1.5.25
TC HRGMv2_1563_47 HRGMv2_1563_47_6 4877 5833 - 3.A.1.5.38
TC HRGMv2_1563_47 HRGMv2_1563_47_7 5991 7604 - 3.A.1.5.27
pfam HRGMv2_1563_47 HRGMv2_1563_47_8 7970 9910 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1563_47 HRGMv2_1563_47_9 9917 11599 - 2.A.66.4.4
Gene ID: HRGMv2_1563_47_3
Type: CAZyme
Location: 972 - 1898 (-)
Gene ID: HRGMv2_1563_47_4
Type: TC
Location: 2030 - 2857 (-)
Gene ID: HRGMv2_1563_47_5
Type: TC
Location: 2858 - 4873 (-)
Gene ID: HRGMv2_1563_47_6
Type: TC
Location: 4877 - 5833 (-)
Gene ID: HRGMv2_1563_47_7
Type: TC
Location: 5991 - 7604 (-)
Gene ID: HRGMv2_1563_47_8
Type: pfam
Location: 7970 - 9910 (-)
Gene ID: HRGMv2_1563_47_9
Type: TC
Location: 9917 - 11599 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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