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Cluster: HRGMv2_1561_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1561_4 HRGMv2_1561_4_44 49303 51642 - 3.A.3.5.15
STP HRGMv2_1561_4 HRGMv2_1561_4_45 52133 54217 - Pkinase
STP HRGMv2_1561_4 HRGMv2_1561_4_46 54389 55351 - FHA
TC HRGMv2_1561_4 HRGMv2_1561_4_47 55951 58200 + 1.I.1.1.3
STP HRGMv2_1561_4 HRGMv2_1561_4_48 58822 59583 + Fer4
NULL(UNKNOWN) HRGMv2_1561_4 HRGMv2_1561_4_49 59927 60016 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1561_4 HRGMv2_1561_4_50 60065 60439 + 4.A.1.2.5
pfam HRGMv2_1561_4 HRGMv2_1561_4_51 60446 61312 + PRD | PRD | CAT_RBD
TC HRGMv2_1561_4 HRGMv2_1561_4_52 61412 63028 + 4.A.1.1.3
CAZyme HRGMv2_1561_4 HRGMv2_1561_4_53 63032 64414 + GH4
Gene ID: HRGMv2_1561_4_44
Type: TC
Location: 49303 - 51642 (-)
Gene ID: HRGMv2_1561_4_45
Type: STP
Location: 52133 - 54217 (-)
Gene ID: HRGMv2_1561_4_46
Type: STP
Location: 54389 - 55351 (-)
Gene ID: HRGMv2_1561_4_47
Type: TC
Location: 55951 - 58200 (+)
Gene ID: HRGMv2_1561_4_48
Type: STP
Location: 58822 - 59583 (+)
Gene ID: HRGMv2_1561_4_49
Type:
Location: 59927 - 60016 (+)
Gene ID: HRGMv2_1561_4_50
Type: TC
Location: 60065 - 60439 (+)
Gene ID: HRGMv2_1561_4_51
Type: pfam
Location: 60446 - 61312 (+)
Gene ID: HRGMv2_1561_4_52
Type: TC
Location: 61412 - 63028 (+)
Gene ID: HRGMv2_1561_4_53
Type: CAZyme
Location: 63032 - 64414 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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