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Cluster: HRGMv2_1561_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1561_33 HRGMv2_1561_33_5 8123 10591 - 4.A.1.1.8
TF HRGMv2_1561_33 HRGMv2_1561_33_6 10801 11520 + GntR
TC HRGMv2_1561_33 HRGMv2_1561_33_7 11827 13143 + 3.A.1.1.45
TC HRGMv2_1561_33 HRGMv2_1561_33_8 13231 14085 + 3.A.1.1.45
TC HRGMv2_1561_33 HRGMv2_1561_33_9 14085 14924 + 3.A.1.1.45
TC HRGMv2_1561_33 HRGMv2_1561_33_10 14993 16192 + 3.A.1.1.22
CAZyme HRGMv2_1561_33 HRGMv2_1561_33_11 16665 18932 - GT35
CAZyme HRGMv2_1561_33 HRGMv2_1561_33_12 19061 20566 - GH77
Gene ID: HRGMv2_1561_33_5
Type: TC
Location: 8123 - 10591 (-)
Gene ID: HRGMv2_1561_33_6
Type: TF
Location: 10801 - 11520 (+)
Gene ID: HRGMv2_1561_33_7
Type: TC
Location: 11827 - 13143 (+)
Gene ID: HRGMv2_1561_33_8
Type: TC
Location: 13231 - 14085 (+)
Gene ID: HRGMv2_1561_33_9
Type: TC
Location: 14085 - 14924 (+)
Gene ID: HRGMv2_1561_33_10
Type: TC
Location: 14993 - 16192 (+)
Gene ID: HRGMv2_1561_33_11
Type: CAZyme
Location: 16665 - 18932 (-)
Gene ID: HRGMv2_1561_33_12
Type: CAZyme
Location: 19061 - 20566 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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