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Cluster: HRGMv2_1560_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1560_24 HRGMv2_1560_24_11 15001 17451 - 4.A.1.1.8
NULL(UNKNOWN) HRGMv2_1560_24 HRGMv2_1560_24_12 17473 17592 + NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_1560_24 HRGMv2_1560_24_13 17676 18395 + GntR
TC HRGMv2_1560_24 HRGMv2_1560_24_14 18702 20018 + 3.A.1.1.45
TC HRGMv2_1560_24 HRGMv2_1560_24_15 20106 20960 + 3.A.1.1.45
TC HRGMv2_1560_24 HRGMv2_1560_24_16 20960 21799 + 3.A.1.1.45
TC HRGMv2_1560_24 HRGMv2_1560_24_17 21867 23066 + 3.A.1.1.22
CAZyme HRGMv2_1560_24 HRGMv2_1560_24_18 23443 25710 - GT35
CAZyme HRGMv2_1560_24 HRGMv2_1560_24_19 25841 27346 - GH77
Gene ID: HRGMv2_1560_24_11
Type: TC
Location: 15001 - 17451 (-)
Gene ID: HRGMv2_1560_24_12
Type:
Location: 17473 - 17592 (+)
Gene ID: HRGMv2_1560_24_13
Type: TF
Location: 17676 - 18395 (+)
Gene ID: HRGMv2_1560_24_14
Type: TC
Location: 18702 - 20018 (+)
Gene ID: HRGMv2_1560_24_15
Type: TC
Location: 20106 - 20960 (+)
Gene ID: HRGMv2_1560_24_16
Type: TC
Location: 20960 - 21799 (+)
Gene ID: HRGMv2_1560_24_17
Type: TC
Location: 21867 - 23066 (+)
Gene ID: HRGMv2_1560_24_18
Type: CAZyme
Location: 23443 - 25710 (-)
Gene ID: HRGMv2_1560_24_19
Type: CAZyme
Location: 25841 - 27346 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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