dbCAN Logo

Cluster: HRGMv2_1559_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1559_1 HRGMv2_1559_1_117 118006 120345 - 3.A.3.5.15
STP HRGMv2_1559_1 HRGMv2_1559_1_118 120918 123002 - Pkinase
STP HRGMv2_1559_1 HRGMv2_1559_1_119 123174 124136 - FHA
TC HRGMv2_1559_1 HRGMv2_1559_1_120 124736 126952 + 1.I.1.1.3
STP HRGMv2_1559_1 HRGMv2_1559_1_121 127574 128335 + Fer4
TC HRGMv2_1559_1 HRGMv2_1559_1_122 128679 129191 + 4.A.1.2.2
pfam HRGMv2_1559_1 HRGMv2_1559_1_123 129210 130064 + PRD | PRD | CAT_RBD
TC HRGMv2_1559_1 HRGMv2_1559_1_124 130164 131780 + 4.A.1.1.3
CAZyme HRGMv2_1559_1 HRGMv2_1559_1_125 131784 133166 + GH4
Gene ID: HRGMv2_1559_1_117
Type: TC
Location: 118006 - 120345 (-)
Gene ID: HRGMv2_1559_1_118
Type: STP
Location: 120918 - 123002 (-)
Gene ID: HRGMv2_1559_1_119
Type: STP
Location: 123174 - 124136 (-)
Gene ID: HRGMv2_1559_1_120
Type: TC
Location: 124736 - 126952 (+)
Gene ID: HRGMv2_1559_1_121
Type: STP
Location: 127574 - 128335 (+)
Gene ID: HRGMv2_1559_1_122
Type: TC
Location: 128679 - 129191 (+)
Gene ID: HRGMv2_1559_1_123
Type: pfam
Location: 129210 - 130064 (+)
Gene ID: HRGMv2_1559_1_124
Type: TC
Location: 130164 - 131780 (+)
Gene ID: HRGMv2_1559_1_125
Type: CAZyme
Location: 131784 - 133166 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List