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Cluster: HRGMv2_1559_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1559_7 HRGMv2_1559_7_27 33285 34961 + 3.A.1.5.35
TC HRGMv2_1559_7 HRGMv2_1559_7_28 35118 36155 + 3.A.1.5.37
TC HRGMv2_1559_7 HRGMv2_1559_7_29 36170 37105 + 3.A.1.5.11
TC HRGMv2_1559_7 HRGMv2_1559_7_30 37108 38199 + 3.A.1.5.34
TC HRGMv2_1559_7 HRGMv2_1559_7_31 38200 39228 + 3.A.1.5.36
STP HRGMv2_1559_7 HRGMv2_1559_7_32 39972 42317 + GAF | SpoIIE
STP HRGMv2_1559_7 HRGMv2_1559_7_33 42396 43142 + STAS
CAZyme HRGMv2_1559_7 HRGMv2_1559_7_34 43728 45461 + GH13_30
Gene ID: HRGMv2_1559_7_27
Type: TC
Location: 33285 - 34961 (+)
Gene ID: HRGMv2_1559_7_28
Type: TC
Location: 35118 - 36155 (+)
Gene ID: HRGMv2_1559_7_29
Type: TC
Location: 36170 - 37105 (+)
Gene ID: HRGMv2_1559_7_30
Type: TC
Location: 37108 - 38199 (+)
Gene ID: HRGMv2_1559_7_31
Type: TC
Location: 38200 - 39228 (+)
Gene ID: HRGMv2_1559_7_32
Type: STP
Location: 39972 - 42317 (+)
Gene ID: HRGMv2_1559_7_33
Type: STP
Location: 42396 - 43142 (+)
Gene ID: HRGMv2_1559_7_34
Type: CAZyme
Location: 43728 - 45461 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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