dbCAN Logo

Cluster: HRGMv2_1558_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1558_8 HRGMv2_1558_8_28 36211 37887 + 3.A.1.5.35
TC HRGMv2_1558_8 HRGMv2_1558_8_29 38044 39081 + 3.A.1.5.37
TC HRGMv2_1558_8 HRGMv2_1558_8_30 39096 40031 + 3.A.1.5.11
TC HRGMv2_1558_8 HRGMv2_1558_8_31 40034 41125 + 3.A.1.5.34
TC HRGMv2_1558_8 HRGMv2_1558_8_32 41126 42154 + 3.A.1.5.36
STP HRGMv2_1558_8 HRGMv2_1558_8_33 42902 45247 + GAF | SpoIIE
STP HRGMv2_1558_8 HRGMv2_1558_8_34 45329 46075 + STAS
CAZyme HRGMv2_1558_8 HRGMv2_1558_8_35 47005 48738 + GH13_30
Gene ID: HRGMv2_1558_8_28
Type: TC
Location: 36211 - 37887 (+)
Gene ID: HRGMv2_1558_8_29
Type: TC
Location: 38044 - 39081 (+)
Gene ID: HRGMv2_1558_8_30
Type: TC
Location: 39096 - 40031 (+)
Gene ID: HRGMv2_1558_8_31
Type: TC
Location: 40034 - 41125 (+)
Gene ID: HRGMv2_1558_8_32
Type: TC
Location: 41126 - 42154 (+)
Gene ID: HRGMv2_1558_8_33
Type: STP
Location: 42902 - 45247 (+)
Gene ID: HRGMv2_1558_8_34
Type: STP
Location: 45329 - 46075 (+)
Gene ID: HRGMv2_1558_8_35
Type: CAZyme
Location: 47005 - 48738 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List