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Cluster: HRGMv2_1558_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1558_8 HRGMv2_1558_8_10 13633 15936 + 2.A.66.4.4
pfam HRGMv2_1558_8 HRGMv2_1558_8_11 15943 17883 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1558_8 HRGMv2_1558_8_12 18249 19862 + 3.A.1.5.27
TC HRGMv2_1558_8 HRGMv2_1558_8_13 20020 20976 + 3.A.1.5.38
TC HRGMv2_1558_8 HRGMv2_1558_8_14 20980 22995 + 3.A.1.5.25
TC HRGMv2_1558_8 HRGMv2_1558_8_15 22996 23823 + 3.A.1.5.27
CAZyme HRGMv2_1558_8 HRGMv2_1558_8_16 23955 24881 + CE7
Gene ID: HRGMv2_1558_8_10
Type: TC
Location: 13633 - 15936 (+)
Gene ID: HRGMv2_1558_8_11
Type: pfam
Location: 15943 - 17883 (+)
Gene ID: HRGMv2_1558_8_12
Type: TC
Location: 18249 - 19862 (+)
Gene ID: HRGMv2_1558_8_13
Type: TC
Location: 20020 - 20976 (+)
Gene ID: HRGMv2_1558_8_14
Type: TC
Location: 20980 - 22995 (+)
Gene ID: HRGMv2_1558_8_15
Type: TC
Location: 22996 - 23823 (+)
Gene ID: HRGMv2_1558_8_16
Type: CAZyme
Location: 23955 - 24881 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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