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Cluster: HRGMv2_1558_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1558_24 HRGMv2_1558_24_6 6988 8493 + GH77
CAZyme HRGMv2_1558_24 HRGMv2_1558_24_7 8622 10889 + GT35
TC HRGMv2_1558_24 HRGMv2_1558_24_8 11345 12544 - 3.A.1.1.22
TC HRGMv2_1558_24 HRGMv2_1558_24_9 12613 13452 - 3.A.1.1.45
TC HRGMv2_1558_24 HRGMv2_1558_24_10 13452 14306 - 3.A.1.1.45
TC HRGMv2_1558_24 HRGMv2_1558_24_11 14394 15710 - 3.A.1.1.45
TF HRGMv2_1558_24 HRGMv2_1558_24_12 16017 16736 - GntR
NULL(UNKNOWN) HRGMv2_1558_24 HRGMv2_1558_24_13 16820 16939 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1558_24 HRGMv2_1558_24_14 16961 19411 + 4.A.1.1.8
Gene ID: HRGMv2_1558_24_6
Type: CAZyme
Location: 6988 - 8493 (+)
Gene ID: HRGMv2_1558_24_7
Type: CAZyme
Location: 8622 - 10889 (+)
Gene ID: HRGMv2_1558_24_8
Type: TC
Location: 11345 - 12544 (-)
Gene ID: HRGMv2_1558_24_9
Type: TC
Location: 12613 - 13452 (-)
Gene ID: HRGMv2_1558_24_10
Type: TC
Location: 13452 - 14306 (-)
Gene ID: HRGMv2_1558_24_11
Type: TC
Location: 14394 - 15710 (-)
Gene ID: HRGMv2_1558_24_12
Type: TF
Location: 16017 - 16736 (-)
Gene ID: HRGMv2_1558_24_13
Type:
Location: 16820 - 16939 (-)
Gene ID: HRGMv2_1558_24_14
Type: TC
Location: 16961 - 19411 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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