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Cluster: HRGMv2_1558_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1558_17 HRGMv2_1558_17_32 29918 31276 - 2.A.33.1.1
pfam HRGMv2_1558_17 HRGMv2_1558_17_33 31544 32467 - DHH | DHHA2
STP HRGMv2_1558_17 HRGMv2_1558_17_34 32634 33587 - Glucokinase
TC HRGMv2_1558_17 HRGMv2_1558_17_35 33829 34161 - 4.A.3.2.3
TC HRGMv2_1558_17 HRGMv2_1558_17_36 34171 34473 - 4.A.3.2.9
TC HRGMv2_1558_17 HRGMv2_1558_17_37 34627 35979 - 4.A.3.2.2
CAZyme HRGMv2_1558_17 HRGMv2_1558_17_38 36100 37500 - GH1
Gene ID: HRGMv2_1558_17_32
Type: TC
Location: 29918 - 31276 (-)
Gene ID: HRGMv2_1558_17_33
Type: pfam
Location: 31544 - 32467 (-)
Gene ID: HRGMv2_1558_17_34
Type: STP
Location: 32634 - 33587 (-)
Gene ID: HRGMv2_1558_17_35
Type: TC
Location: 33829 - 34161 (-)
Gene ID: HRGMv2_1558_17_36
Type: TC
Location: 34171 - 34473 (-)
Gene ID: HRGMv2_1558_17_37
Type: TC
Location: 34627 - 35979 (-)
Gene ID: HRGMv2_1558_17_38
Type: CAZyme
Location: 36100 - 37500 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_1558_17_36 vegan > omnivore 1.06222 0.01560

🧭 Explore Read Mapping of CGC

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