dbCAN Logo

Cluster: HRGMv2_1555_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1555_29 HRGMv2_1555_29_9 10619 12124 + GH77
CAZyme HRGMv2_1555_29 HRGMv2_1555_29_10 12254 14521 + GT35
TC HRGMv2_1555_29 HRGMv2_1555_29_11 15056 16252 - 3.A.1.1.22
TC HRGMv2_1555_29 HRGMv2_1555_29_12 16321 17160 - 3.A.1.1.45
TC HRGMv2_1555_29 HRGMv2_1555_29_13 17160 18014 - 3.A.1.1.45
TC HRGMv2_1555_29 HRGMv2_1555_29_14 18102 19418 - 3.A.1.1.45
TF HRGMv2_1555_29 HRGMv2_1555_29_15 19725 20444 - GntR
TC HRGMv2_1555_29 HRGMv2_1555_29_16 20674 23124 + 4.A.1.1.8
Gene ID: HRGMv2_1555_29_9
Type: CAZyme
Location: 10619 - 12124 (+)
Gene ID: HRGMv2_1555_29_10
Type: CAZyme
Location: 12254 - 14521 (+)
Gene ID: HRGMv2_1555_29_11
Type: TC
Location: 15056 - 16252 (-)
Gene ID: HRGMv2_1555_29_12
Type: TC
Location: 16321 - 17160 (-)
Gene ID: HRGMv2_1555_29_13
Type: TC
Location: 17160 - 18014 (-)
Gene ID: HRGMv2_1555_29_14
Type: TC
Location: 18102 - 19418 (-)
Gene ID: HRGMv2_1555_29_15
Type: TF
Location: 19725 - 20444 (-)
Gene ID: HRGMv2_1555_29_16
Type: TC
Location: 20674 - 23124 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List