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Cluster: HRGMv2_1555_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1555_28 HRGMv2_1555_28_8 6898 7824 - CE7
TC HRGMv2_1555_28 HRGMv2_1555_28_9 7956 8783 - 3.A.1.5.27
TC HRGMv2_1555_28 HRGMv2_1555_28_10 8784 10799 - 3.A.1.5.25
TC HRGMv2_1555_28 HRGMv2_1555_28_11 10803 11759 - 3.A.1.5.38
TC HRGMv2_1555_28 HRGMv2_1555_28_12 11917 13530 - 3.A.1.5.27
pfam HRGMv2_1555_28 HRGMv2_1555_28_13 13896 15836 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1555_28 HRGMv2_1555_28_14 15843 17525 - 2.A.66.4.4
Gene ID: HRGMv2_1555_28_8
Type: CAZyme
Location: 6898 - 7824 (-)
Gene ID: HRGMv2_1555_28_9
Type: TC
Location: 7956 - 8783 (-)
Gene ID: HRGMv2_1555_28_10
Type: TC
Location: 8784 - 10799 (-)
Gene ID: HRGMv2_1555_28_11
Type: TC
Location: 10803 - 11759 (-)
Gene ID: HRGMv2_1555_28_12
Type: TC
Location: 11917 - 13530 (-)
Gene ID: HRGMv2_1555_28_13
Type: pfam
Location: 13896 - 15836 (-)
Gene ID: HRGMv2_1555_28_14
Type: TC
Location: 15843 - 17525 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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