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Cluster: HRGMv2_1554_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1554_28 HRGMv2_1554_28_4 5019 6524 + GH77
CAZyme HRGMv2_1554_28 HRGMv2_1554_28_5 6653 8920 + GT35
TC HRGMv2_1554_28 HRGMv2_1554_28_6 9386 10585 - 3.A.1.1.22
TC HRGMv2_1554_28 HRGMv2_1554_28_7 10654 11493 - 3.A.1.1.45
TC HRGMv2_1554_28 HRGMv2_1554_28_8 11493 12347 - 3.A.1.1.45
TC HRGMv2_1554_28 HRGMv2_1554_28_9 12435 13751 - 3.A.1.1.45
TF HRGMv2_1554_28 HRGMv2_1554_28_10 14058 14777 - GntR
TC HRGMv2_1554_28 HRGMv2_1554_28_11 15034 17451 + 4.A.1.1.8
Gene ID: HRGMv2_1554_28_4
Type: CAZyme
Location: 5019 - 6524 (+)
Gene ID: HRGMv2_1554_28_5
Type: CAZyme
Location: 6653 - 8920 (+)
Gene ID: HRGMv2_1554_28_6
Type: TC
Location: 9386 - 10585 (-)
Gene ID: HRGMv2_1554_28_7
Type: TC
Location: 10654 - 11493 (-)
Gene ID: HRGMv2_1554_28_8
Type: TC
Location: 11493 - 12347 (-)
Gene ID: HRGMv2_1554_28_9
Type: TC
Location: 12435 - 13751 (-)
Gene ID: HRGMv2_1554_28_10
Type: TF
Location: 14058 - 14777 (-)
Gene ID: HRGMv2_1554_28_11
Type: TC
Location: 15034 - 17451 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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