dbCAN Logo

Cluster: HRGMv2_1553_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1553_16 HRGMv2_1553_16_3 2268 3950 + 2.A.66.4.4
pfam HRGMv2_1553_16 HRGMv2_1553_16_4 3957 5897 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1553_16 HRGMv2_1553_16_5 6263 7876 + 3.A.1.5.27
TC HRGMv2_1553_16 HRGMv2_1553_16_6 8034 8990 + 3.A.1.5.38
TC HRGMv2_1553_16 HRGMv2_1553_16_7 8994 11009 + 3.A.1.5.25
TC HRGMv2_1553_16 HRGMv2_1553_16_8 11010 11837 + 3.A.1.5.27
CAZyme HRGMv2_1553_16 HRGMv2_1553_16_9 11969 12895 + CE7
Gene ID: HRGMv2_1553_16_3
Type: TC
Location: 2268 - 3950 (+)
Gene ID: HRGMv2_1553_16_4
Type: pfam
Location: 3957 - 5897 (+)
Gene ID: HRGMv2_1553_16_5
Type: TC
Location: 6263 - 7876 (+)
Gene ID: HRGMv2_1553_16_6
Type: TC
Location: 8034 - 8990 (+)
Gene ID: HRGMv2_1553_16_7
Type: TC
Location: 8994 - 11009 (+)
Gene ID: HRGMv2_1553_16_8
Type: TC
Location: 11010 - 11837 (+)
Gene ID: HRGMv2_1553_16_9
Type: CAZyme
Location: 11969 - 12895 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List