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Cluster: HRGMv2_1552_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1552_12 HRGMv2_1552_12_10 13634 15316 + 2.A.66.4.4
pfam HRGMv2_1552_12 HRGMv2_1552_12_11 15323 17263 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1552_12 HRGMv2_1552_12_12 17629 19242 + 3.A.1.5.27
TC HRGMv2_1552_12 HRGMv2_1552_12_13 19400 20356 + 3.A.1.5.38
TC HRGMv2_1552_12 HRGMv2_1552_12_14 20360 22375 + 3.A.1.5.25
TC HRGMv2_1552_12 HRGMv2_1552_12_15 22376 23203 + 3.A.1.5.27
CAZyme HRGMv2_1552_12 HRGMv2_1552_12_16 23335 24261 + CE7
Gene ID: HRGMv2_1552_12_10
Type: TC
Location: 13634 - 15316 (+)
Gene ID: HRGMv2_1552_12_11
Type: pfam
Location: 15323 - 17263 (+)
Gene ID: HRGMv2_1552_12_12
Type: TC
Location: 17629 - 19242 (+)
Gene ID: HRGMv2_1552_12_13
Type: TC
Location: 19400 - 20356 (+)
Gene ID: HRGMv2_1552_12_14
Type: TC
Location: 20360 - 22375 (+)
Gene ID: HRGMv2_1552_12_15
Type: TC
Location: 22376 - 23203 (+)
Gene ID: HRGMv2_1552_12_16
Type: CAZyme
Location: 23335 - 24261 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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