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Cluster: HRGMv2_1549_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1549_33 HRGMv2_1549_33_5 7985 10435 - 4.A.1.1.8
TF HRGMv2_1549_33 HRGMv2_1549_33_6 10660 11379 + GntR
TC HRGMv2_1549_33 HRGMv2_1549_33_7 11686 13002 + 3.A.1.1.45
TC HRGMv2_1549_33 HRGMv2_1549_33_8 13090 13944 + 3.A.1.1.45
TC HRGMv2_1549_33 HRGMv2_1549_33_9 13944 14783 + 3.A.1.1.45
TC HRGMv2_1549_33 HRGMv2_1549_33_10 14852 16048 + 3.A.1.1.22
CAZyme HRGMv2_1549_33 HRGMv2_1549_33_11 16596 18863 - GT35
CAZyme HRGMv2_1549_33 HRGMv2_1549_33_12 18994 20499 - GH77
Gene ID: HRGMv2_1549_33_5
Type: TC
Location: 7985 - 10435 (-)
Gene ID: HRGMv2_1549_33_6
Type: TF
Location: 10660 - 11379 (+)
Gene ID: HRGMv2_1549_33_7
Type: TC
Location: 11686 - 13002 (+)
Gene ID: HRGMv2_1549_33_8
Type: TC
Location: 13090 - 13944 (+)
Gene ID: HRGMv2_1549_33_9
Type: TC
Location: 13944 - 14783 (+)
Gene ID: HRGMv2_1549_33_10
Type: TC
Location: 14852 - 16048 (+)
Gene ID: HRGMv2_1549_33_11
Type: CAZyme
Location: 16596 - 18863 (-)
Gene ID: HRGMv2_1549_33_12
Type: CAZyme
Location: 18994 - 20499 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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