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Cluster: HRGMv2_1548_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1548_7 HRGMv2_1548_7_52 56469 57845 - GH13_20
TC HRGMv2_1548_7 HRGMv2_1548_7_53 58028 59224 - 2.A.1.2.18
TC HRGMv2_1548_7 HRGMv2_1548_7_54 59346 61706 - 9.A.8.1.6
peptidase HRGMv2_1548_7 HRGMv2_1548_7_55 62072 62974 - S09.UPW
TC HRGMv2_1548_7 HRGMv2_1548_7_56 63219 63782 + 4.A.1.2.6
pfam HRGMv2_1548_7 HRGMv2_1548_7_57 63964 65367 + tRNA-synt_2 | tRNA_anti-codon
NULL(UNKNOWN) HRGMv2_1548_7 HRGMv2_1548_7_58 65619 66404 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1548_7 HRGMv2_1548_7_59 66565 67545 + 3.A.1.34.1
TC HRGMv2_1548_7 HRGMv2_1548_7_60 67750 68673 + 3.A.1.34.1
TC HRGMv2_1548_7 HRGMv2_1548_7_61 68666 69460 + 3.A.1.34.1
pfam HRGMv2_1548_7 HRGMv2_1548_7_62 69618 71645 + Metallophos | 5_nucleotid_C
TC HRGMv2_1548_7 HRGMv2_1548_7_63 71774 72541 + 1.A.23.4.2
pfam HRGMv2_1548_7 HRGMv2_1548_7_64 72635 74551 + Bmp
pfam HRGMv2_1548_7 HRGMv2_1548_7_65 74548 75258 + Metallophos | Metallophos_2
TC HRGMv2_1548_7 HRGMv2_1548_7_66 75386 76093 - 1.C.82.1.1
Gene ID: HRGMv2_1548_7_52
Type: CAZyme
Location: 56469 - 57845 (-)
Gene ID: HRGMv2_1548_7_53
Type: TC
Location: 58028 - 59224 (-)
Gene ID: HRGMv2_1548_7_54
Type: TC
Location: 59346 - 61706 (-)
Gene ID: HRGMv2_1548_7_55
Type: peptidase
Location: 62072 - 62974 (-)
Gene ID: HRGMv2_1548_7_56
Type: TC
Location: 63219 - 63782 (+)
Gene ID: HRGMv2_1548_7_57
Type: pfam
Location: 63964 - 65367 (+)
Gene ID: HRGMv2_1548_7_58
Type:
Location: 65619 - 66404 (+)
Gene ID: HRGMv2_1548_7_59
Type: TC
Location: 66565 - 67545 (+)
Gene ID: HRGMv2_1548_7_60
Type: TC
Location: 67750 - 68673 (+)
Gene ID: HRGMv2_1548_7_61
Type: TC
Location: 68666 - 69460 (+)
Gene ID: HRGMv2_1548_7_62
Type: pfam
Location: 69618 - 71645 (+)
Gene ID: HRGMv2_1548_7_63
Type: TC
Location: 71774 - 72541 (+)
Gene ID: HRGMv2_1548_7_64
Type: pfam
Location: 72635 - 74551 (+)
Gene ID: HRGMv2_1548_7_65
Type: pfam
Location: 74548 - 75258 (+)
Gene ID: HRGMv2_1548_7_66
Type: TC
Location: 75386 - 76093 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_1548_7_62 vegan > omnivore 1.94777 0.01165
HRGMv2_1548_7_62 vegetarian > omnivore 1.40669 0.00863

🧭 Explore Read Mapping of CGC

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