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Cluster: HRGMv2_1548_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1548_20 HRGMv2_1548_20_10 13622 15304 + 2.A.66.4.4
pfam HRGMv2_1548_20 HRGMv2_1548_20_11 15311 17251 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1548_20 HRGMv2_1548_20_12 17617 19230 + 3.A.1.5.27
TC HRGMv2_1548_20 HRGMv2_1548_20_13 19386 20342 + 3.A.1.5.38
TC HRGMv2_1548_20 HRGMv2_1548_20_14 20346 22361 + 3.A.1.5.25
TC HRGMv2_1548_20 HRGMv2_1548_20_15 22362 23189 + 3.A.1.5.27
CAZyme HRGMv2_1548_20 HRGMv2_1548_20_16 23321 24247 + CE7
Gene ID: HRGMv2_1548_20_10
Type: TC
Location: 13622 - 15304 (+)
Gene ID: HRGMv2_1548_20_11
Type: pfam
Location: 15311 - 17251 (+)
Gene ID: HRGMv2_1548_20_12
Type: TC
Location: 17617 - 19230 (+)
Gene ID: HRGMv2_1548_20_13
Type: TC
Location: 19386 - 20342 (+)
Gene ID: HRGMv2_1548_20_14
Type: TC
Location: 20346 - 22361 (+)
Gene ID: HRGMv2_1548_20_15
Type: TC
Location: 22362 - 23189 (+)
Gene ID: HRGMv2_1548_20_16
Type: CAZyme
Location: 23321 - 24247 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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