dbCAN Logo

Cluster: HRGMv2_1547_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1547_2 HRGMv2_1547_2_128 141594 142478 - CE7
TC HRGMv2_1547_2 HRGMv2_1547_2_129 142652 143479 - 3.A.1.5.27
TC HRGMv2_1547_2 HRGMv2_1547_2_130 143480 145495 - 3.A.1.5.25
TC HRGMv2_1547_2 HRGMv2_1547_2_131 145499 146455 - 3.A.1.5.38
TC HRGMv2_1547_2 HRGMv2_1547_2_132 146613 148226 - 3.A.1.5.27
pfam HRGMv2_1547_2 HRGMv2_1547_2_133 148592 150532 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1547_2 HRGMv2_1547_2_134 150539 152221 - 2.A.66.4.4
Gene ID: HRGMv2_1547_2_128
Type: CAZyme
Location: 141594 - 142478 (-)
Gene ID: HRGMv2_1547_2_129
Type: TC
Location: 142652 - 143479 (-)
Gene ID: HRGMv2_1547_2_130
Type: TC
Location: 143480 - 145495 (-)
Gene ID: HRGMv2_1547_2_131
Type: TC
Location: 145499 - 146455 (-)
Gene ID: HRGMv2_1547_2_132
Type: TC
Location: 146613 - 148226 (-)
Gene ID: HRGMv2_1547_2_133
Type: pfam
Location: 148592 - 150532 (-)
Gene ID: HRGMv2_1547_2_134
Type: TC
Location: 150539 - 152221 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List