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Cluster: HRGMv2_1547_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1547_25 HRGMv2_1547_25_5 3829 4998 - CE9
STP HRGMv2_1547_25 HRGMv2_1547_25_6 5116 6282 - SIS | SIS
TF HRGMv2_1547_25 HRGMv2_1547_25_7 6397 7128 - GntR
TC HRGMv2_1547_25 HRGMv2_1547_25_8 7314 8396 - 4.A.6.1.4
TC HRGMv2_1547_25 HRGMv2_1547_25_9 8386 9186 - 4.A.6.1.4
TC HRGMv2_1547_25 HRGMv2_1547_25_10 9277 9759 - 4.A.6.1.4
pfam HRGMv2_1547_25 HRGMv2_1547_25_11 9796 10077 - YajC
TC HRGMv2_1547_25 HRGMv2_1547_25_12 10077 10520 - 4.A.6.1.16
Gene ID: HRGMv2_1547_25_5
Type: CAZyme
Location: 3829 - 4998 (-)
Gene ID: HRGMv2_1547_25_6
Type: STP
Location: 5116 - 6282 (-)
Gene ID: HRGMv2_1547_25_7
Type: TF
Location: 6397 - 7128 (-)
Gene ID: HRGMv2_1547_25_8
Type: TC
Location: 7314 - 8396 (-)
Gene ID: HRGMv2_1547_25_9
Type: TC
Location: 8386 - 9186 (-)
Gene ID: HRGMv2_1547_25_10
Type: TC
Location: 9277 - 9759 (-)
Gene ID: HRGMv2_1547_25_11
Type: pfam
Location: 9796 - 10077 (-)
Gene ID: HRGMv2_1547_25_12
Type: TC
Location: 10077 - 10520 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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