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Cluster: HRGMv2_1547_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1547_2 HRGMv2_1547_2_109 118083 120290 - GH13_30
STP HRGMv2_1547_2 HRGMv2_1547_2_110 120402 121148 - STAS
STP HRGMv2_1547_2 HRGMv2_1547_2_111 121227 123572 - GAF | SpoIIE
TC HRGMv2_1547_2 HRGMv2_1547_2_112 124313 125341 - 3.A.1.5.36
TC HRGMv2_1547_2 HRGMv2_1547_2_113 125342 126433 - 3.A.1.5.36
TC HRGMv2_1547_2 HRGMv2_1547_2_114 126436 127371 - 3.A.1.5.11
TC HRGMv2_1547_2 HRGMv2_1547_2_115 127386 128423 - 3.A.1.5.37
TC HRGMv2_1547_2 HRGMv2_1547_2_116 128581 130257 - 3.A.1.5.35
Gene ID: HRGMv2_1547_2_109
Type: CAZyme
Location: 118083 - 120290 (-)
Gene ID: HRGMv2_1547_2_110
Type: STP
Location: 120402 - 121148 (-)
Gene ID: HRGMv2_1547_2_111
Type: STP
Location: 121227 - 123572 (-)
Gene ID: HRGMv2_1547_2_112
Type: TC
Location: 124313 - 125341 (-)
Gene ID: HRGMv2_1547_2_113
Type: TC
Location: 125342 - 126433 (-)
Gene ID: HRGMv2_1547_2_114
Type: TC
Location: 126436 - 127371 (-)
Gene ID: HRGMv2_1547_2_115
Type: TC
Location: 127386 - 128423 (-)
Gene ID: HRGMv2_1547_2_116
Type: TC
Location: 128581 - 130257 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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