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Cluster: HRGMv2_1545_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1545_6 HRGMv2_1545_6_5 7839 10289 - 4.A.1.1.8
NULL(UNKNOWN) HRGMv2_1545_6 HRGMv2_1545_6_6 10311 10430 + NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_1545_6 HRGMv2_1545_6_7 10514 11233 + GntR
TC HRGMv2_1545_6 HRGMv2_1545_6_8 11540 12856 + 3.A.1.1.45
TC HRGMv2_1545_6 HRGMv2_1545_6_9 12944 13798 + 3.A.1.1.45
TC HRGMv2_1545_6 HRGMv2_1545_6_10 13798 14637 + 3.A.1.1.45
TC HRGMv2_1545_6 HRGMv2_1545_6_11 14706 15905 + 3.A.1.1.22
CAZyme HRGMv2_1545_6 HRGMv2_1545_6_12 16362 18629 - GT35
CAZyme HRGMv2_1545_6 HRGMv2_1545_6_13 18759 20264 - GH77
Gene ID: HRGMv2_1545_6_5
Type: TC
Location: 7839 - 10289 (-)
Gene ID: HRGMv2_1545_6_6
Type:
Location: 10311 - 10430 (+)
Gene ID: HRGMv2_1545_6_7
Type: TF
Location: 10514 - 11233 (+)
Gene ID: HRGMv2_1545_6_8
Type: TC
Location: 11540 - 12856 (+)
Gene ID: HRGMv2_1545_6_9
Type: TC
Location: 12944 - 13798 (+)
Gene ID: HRGMv2_1545_6_10
Type: TC
Location: 13798 - 14637 (+)
Gene ID: HRGMv2_1545_6_11
Type: TC
Location: 14706 - 15905 (+)
Gene ID: HRGMv2_1545_6_12
Type: CAZyme
Location: 16362 - 18629 (-)
Gene ID: HRGMv2_1545_6_13
Type: CAZyme
Location: 18759 - 20264 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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