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Cluster: HRGMv2_1545_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1545_15 HRGMv2_1545_15_10 13625 15307 + 2.A.66.4.4
pfam HRGMv2_1545_15 HRGMv2_1545_15_11 15314 17254 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1545_15 HRGMv2_1545_15_12 17620 19233 + 3.A.1.5.27
TC HRGMv2_1545_15 HRGMv2_1545_15_13 19391 20347 + 3.A.1.5.38
TC HRGMv2_1545_15 HRGMv2_1545_15_14 20351 22366 + 3.A.1.5.25
TC HRGMv2_1545_15 HRGMv2_1545_15_15 22367 23194 + 3.A.1.5.27
CAZyme HRGMv2_1545_15 HRGMv2_1545_15_16 23326 24252 + CE7
Gene ID: HRGMv2_1545_15_10
Type: TC
Location: 13625 - 15307 (+)
Gene ID: HRGMv2_1545_15_11
Type: pfam
Location: 15314 - 17254 (+)
Gene ID: HRGMv2_1545_15_12
Type: TC
Location: 17620 - 19233 (+)
Gene ID: HRGMv2_1545_15_13
Type: TC
Location: 19391 - 20347 (+)
Gene ID: HRGMv2_1545_15_14
Type: TC
Location: 20351 - 22366 (+)
Gene ID: HRGMv2_1545_15_15
Type: TC
Location: 22367 - 23194 (+)
Gene ID: HRGMv2_1545_15_16
Type: CAZyme
Location: 23326 - 24252 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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