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Cluster: HRGMv2_1541_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1541_49 HRGMv2_1541_49_1 3 890 - GH1
TC HRGMv2_1541_49 HRGMv2_1541_49_2 966 2723 - 4.A.3.1.1
TF HRGMv2_1541_49 HRGMv2_1541_49_3 2999 4009 + LacI
CAZyme HRGMv2_1541_49 HRGMv2_1541_49_4 4440 5879 - GH1
TC HRGMv2_1541_49 HRGMv2_1541_49_5 6076 7206 - 4.A.3.1.1
TC HRGMv2_1541_49 HRGMv2_1541_49_6 7207 7848 - 4.A.3.1.1
TF HRGMv2_1541_49 HRGMv2_1541_49_7 8205 9209 + LacI
TC HRGMv2_1541_49 HRGMv2_1541_49_8 9424 9762 + 4.A.3.1.2
Gene ID: HRGMv2_1541_49_1
Type: CAZyme
Location: 3 - 890 (-)
Gene ID: HRGMv2_1541_49_2
Type: TC
Location: 966 - 2723 (-)
Gene ID: HRGMv2_1541_49_3
Type: TF
Location: 2999 - 4009 (+)
Gene ID: HRGMv2_1541_49_4
Type: CAZyme
Location: 4440 - 5879 (-)
Gene ID: HRGMv2_1541_49_5
Type: TC
Location: 6076 - 7206 (-)
Gene ID: HRGMv2_1541_49_6
Type: TC
Location: 7207 - 7848 (-)
Gene ID: HRGMv2_1541_49_7
Type: TF
Location: 8205 - 9209 (+)
Gene ID: HRGMv2_1541_49_8
Type: TC
Location: 9424 - 9762 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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