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Cluster: HRGMv2_1538_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1538_58 HRGMv2_1538_58_3 2143 3543 + GH1
TC HRGMv2_1538_58 HRGMv2_1538_58_4 3664 5016 + 4.A.3.2.2
TC HRGMv2_1538_58 HRGMv2_1538_58_5 5171 5473 + 4.A.3.2.9
pfam HRGMv2_1538_58 HRGMv2_1538_58_6 5483 5815 + PTS_IIA
sulfatase HRGMv2_1538_58 HRGMv2_1538_58_7 5941 6624 + S1_11
TC HRGMv2_1538_58 HRGMv2_1538_58_8 6634 6942 + 4.A.3.2.8
STP HRGMv2_1538_58 HRGMv2_1538_58_9 7130 8083 + Glucokinase
pfam HRGMv2_1538_58 HRGMv2_1538_58_10 8229 9152 + DHH | DHHA2
TC HRGMv2_1538_58 HRGMv2_1538_58_11 9420 10778 + 2.A.33.1.1
Gene ID: HRGMv2_1538_58_3
Type: CAZyme
Location: 2143 - 3543 (+)
Gene ID: HRGMv2_1538_58_4
Type: TC
Location: 3664 - 5016 (+)
Gene ID: HRGMv2_1538_58_5
Type: TC
Location: 5171 - 5473 (+)
Gene ID: HRGMv2_1538_58_6
Type: pfam
Location: 5483 - 5815 (+)
Gene ID: HRGMv2_1538_58_7
Type: sulfatase
Location: 5941 - 6624 (+)
Gene ID: HRGMv2_1538_58_8
Type: TC
Location: 6634 - 6942 (+)
Gene ID: HRGMv2_1538_58_9
Type: STP
Location: 7130 - 8083 (+)
Gene ID: HRGMv2_1538_58_10
Type: pfam
Location: 8229 - 9152 (+)
Gene ID: HRGMv2_1538_58_11
Type: TC
Location: 9420 - 10778 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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