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Cluster: HRGMv2_1538_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1538_33 HRGMv2_1538_33_6 7110 8615 + GH77
CAZyme HRGMv2_1538_33 HRGMv2_1538_33_7 8745 11012 + GT35
TC HRGMv2_1538_33 HRGMv2_1538_33_8 11469 12668 - 3.A.1.1.22
TC HRGMv2_1538_33 HRGMv2_1538_33_9 12737 13576 - 3.A.1.1.45
TC HRGMv2_1538_33 HRGMv2_1538_33_10 13576 14430 - 3.A.1.1.45
TC HRGMv2_1538_33 HRGMv2_1538_33_11 14518 15834 - 3.A.1.1.45
TF HRGMv2_1538_33 HRGMv2_1538_33_12 16141 16860 - GntR
NULL(UNKNOWN) HRGMv2_1538_33 HRGMv2_1538_33_13 16944 17063 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1538_33 HRGMv2_1538_33_14 17085 19535 + 4.A.1.1.8
Gene ID: HRGMv2_1538_33_6
Type: CAZyme
Location: 7110 - 8615 (+)
Gene ID: HRGMv2_1538_33_7
Type: CAZyme
Location: 8745 - 11012 (+)
Gene ID: HRGMv2_1538_33_8
Type: TC
Location: 11469 - 12668 (-)
Gene ID: HRGMv2_1538_33_9
Type: TC
Location: 12737 - 13576 (-)
Gene ID: HRGMv2_1538_33_10
Type: TC
Location: 13576 - 14430 (-)
Gene ID: HRGMv2_1538_33_11
Type: TC
Location: 14518 - 15834 (-)
Gene ID: HRGMv2_1538_33_12
Type: TF
Location: 16141 - 16860 (-)
Gene ID: HRGMv2_1538_33_13
Type:
Location: 16944 - 17063 (-)
Gene ID: HRGMv2_1538_33_14
Type: TC
Location: 17085 - 19535 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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