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Cluster: HRGMv2_1538_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1538_17 HRGMv2_1538_17_14 14439 14777 - 4.A.3.1.2
TF HRGMv2_1538_17 HRGMv2_1538_17_15 14991 15995 - LacI
TC HRGMv2_1538_17 HRGMv2_1538_17_16 16351 18123 + 4.A.3.1.1
CAZyme HRGMv2_1538_17 HRGMv2_1538_17_17 18190 19629 + GH1
TF HRGMv2_1538_17 HRGMv2_1538_17_18 19818 20828 - LacI
TC HRGMv2_1538_17 HRGMv2_1538_17_19 21104 22861 + 4.A.3.1.1
CAZyme HRGMv2_1538_17 HRGMv2_1538_17_20 22937 24358 + GH1
Gene ID: HRGMv2_1538_17_14
Type: TC
Location: 14439 - 14777 (-)
Gene ID: HRGMv2_1538_17_15
Type: TF
Location: 14991 - 15995 (-)
Gene ID: HRGMv2_1538_17_16
Type: TC
Location: 16351 - 18123 (+)
Gene ID: HRGMv2_1538_17_17
Type: CAZyme
Location: 18190 - 19629 (+)
Gene ID: HRGMv2_1538_17_18
Type: TF
Location: 19818 - 20828 (-)
Gene ID: HRGMv2_1538_17_19
Type: TC
Location: 21104 - 22861 (+)
Gene ID: HRGMv2_1538_17_20
Type: CAZyme
Location: 22937 - 24358 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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