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Cluster: HRGMv2_1537_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1537_13 HRGMv2_1537_13_21 16932 18353 - GH1
TC HRGMv2_1537_13 HRGMv2_1537_13_22 18428 20206 - 4.A.3.1.1
TF HRGMv2_1537_13 HRGMv2_1537_13_23 20482 21492 + LacI
CAZyme HRGMv2_1537_13 HRGMv2_1537_13_24 21682 23121 - GH1
TC HRGMv2_1537_13 HRGMv2_1537_13_25 23187 24962 - 4.A.3.1.1
TF HRGMv2_1537_13 HRGMv2_1537_13_26 25319 26323 + LacI
TC HRGMv2_1537_13 HRGMv2_1537_13_27 26538 26876 + 4.A.3.1.2
Gene ID: HRGMv2_1537_13_21
Type: CAZyme
Location: 16932 - 18353 (-)
Gene ID: HRGMv2_1537_13_22
Type: TC
Location: 18428 - 20206 (-)
Gene ID: HRGMv2_1537_13_23
Type: TF
Location: 20482 - 21492 (+)
Gene ID: HRGMv2_1537_13_24
Type: CAZyme
Location: 21682 - 23121 (-)
Gene ID: HRGMv2_1537_13_25
Type: TC
Location: 23187 - 24962 (-)
Gene ID: HRGMv2_1537_13_26
Type: TF
Location: 25319 - 26323 (+)
Gene ID: HRGMv2_1537_13_27
Type: TC
Location: 26538 - 26876 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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