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Cluster: HRGMv2_1537_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1537_2 HRGMv2_1537_2_39 44393 46732 - 3.A.3.5.15
STP HRGMv2_1537_2 HRGMv2_1537_2_40 47148 49232 - Pkinase
STP HRGMv2_1537_2 HRGMv2_1537_2_41 49404 50366 - FHA
TC HRGMv2_1537_2 HRGMv2_1537_2_42 50965 53214 + 1.I.1.1.3
STP HRGMv2_1537_2 HRGMv2_1537_2_43 53837 54598 + Fer4
NULL(UNKNOWN) HRGMv2_1537_2 HRGMv2_1537_2_44 54695 54928 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1537_2 HRGMv2_1537_2_45 54925 55455 + 4.A.1.2.5
pfam HRGMv2_1537_2 HRGMv2_1537_2_46 55474 56328 + PRD | PRD | CAT_RBD
TC HRGMv2_1537_2 HRGMv2_1537_2_47 56428 58044 + 4.A.1.1.3
CAZyme HRGMv2_1537_2 HRGMv2_1537_2_48 58048 59430 + GH4
Gene ID: HRGMv2_1537_2_39
Type: TC
Location: 44393 - 46732 (-)
Gene ID: HRGMv2_1537_2_40
Type: STP
Location: 47148 - 49232 (-)
Gene ID: HRGMv2_1537_2_41
Type: STP
Location: 49404 - 50366 (-)
Gene ID: HRGMv2_1537_2_42
Type: TC
Location: 50965 - 53214 (+)
Gene ID: HRGMv2_1537_2_43
Type: STP
Location: 53837 - 54598 (+)
Gene ID: HRGMv2_1537_2_44
Type:
Location: 54695 - 54928 (+)
Gene ID: HRGMv2_1537_2_45
Type: TC
Location: 54925 - 55455 (+)
Gene ID: HRGMv2_1537_2_46
Type: pfam
Location: 55474 - 56328 (+)
Gene ID: HRGMv2_1537_2_47
Type: TC
Location: 56428 - 58044 (+)
Gene ID: HRGMv2_1537_2_48
Type: CAZyme
Location: 58048 - 59430 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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