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Cluster: HRGMv2_1537_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1537_37 HRGMv2_1537_37_3 2526 4976 - 4.A.1.1.8
NULL(UNKNOWN) HRGMv2_1537_37 HRGMv2_1537_37_4 4998 5117 + NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_1537_37 HRGMv2_1537_37_5 5201 5920 + GntR
TC HRGMv2_1537_37 HRGMv2_1537_37_6 6227 7543 + 3.A.1.1.45
TC HRGMv2_1537_37 HRGMv2_1537_37_7 7631 8485 + 3.A.1.1.45
TC HRGMv2_1537_37 HRGMv2_1537_37_8 8485 9324 + 3.A.1.1.45
TC HRGMv2_1537_37 HRGMv2_1537_37_9 9393 10592 + 3.A.1.1.22
CAZyme HRGMv2_1537_37 HRGMv2_1537_37_10 11049 13316 - GT35
CAZyme HRGMv2_1537_37 HRGMv2_1537_37_11 13444 14949 - GH77
Gene ID: HRGMv2_1537_37_3
Type: TC
Location: 2526 - 4976 (-)
Gene ID: HRGMv2_1537_37_4
Type:
Location: 4998 - 5117 (+)
Gene ID: HRGMv2_1537_37_5
Type: TF
Location: 5201 - 5920 (+)
Gene ID: HRGMv2_1537_37_6
Type: TC
Location: 6227 - 7543 (+)
Gene ID: HRGMv2_1537_37_7
Type: TC
Location: 7631 - 8485 (+)
Gene ID: HRGMv2_1537_37_8
Type: TC
Location: 8485 - 9324 (+)
Gene ID: HRGMv2_1537_37_9
Type: TC
Location: 9393 - 10592 (+)
Gene ID: HRGMv2_1537_37_10
Type: CAZyme
Location: 11049 - 13316 (-)
Gene ID: HRGMv2_1537_37_11
Type: CAZyme
Location: 13444 - 14949 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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