dbCAN Logo

Cluster: HRGMv2_1535_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1535_24 HRGMv2_1535_24_6 8073 9578 + GH77
CAZyme HRGMv2_1535_24 HRGMv2_1535_24_7 9708 11975 + GT35
TC HRGMv2_1535_24 HRGMv2_1535_24_8 12348 13547 - 3.A.1.1.22
TC HRGMv2_1535_24 HRGMv2_1535_24_9 13616 14455 - 3.A.1.1.45
TC HRGMv2_1535_24 HRGMv2_1535_24_10 14455 15309 - 3.A.1.1.45
TC HRGMv2_1535_24 HRGMv2_1535_24_11 15397 16713 - 3.A.1.1.45
TF HRGMv2_1535_24 HRGMv2_1535_24_12 17020 17739 - GntR
NULL(UNKNOWN) HRGMv2_1535_24 HRGMv2_1535_24_13 17826 17942 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1535_24 HRGMv2_1535_24_14 17964 20414 + 4.A.1.1.8
Gene ID: HRGMv2_1535_24_6
Type: CAZyme
Location: 8073 - 9578 (+)
Gene ID: HRGMv2_1535_24_7
Type: CAZyme
Location: 9708 - 11975 (+)
Gene ID: HRGMv2_1535_24_8
Type: TC
Location: 12348 - 13547 (-)
Gene ID: HRGMv2_1535_24_9
Type: TC
Location: 13616 - 14455 (-)
Gene ID: HRGMv2_1535_24_10
Type: TC
Location: 14455 - 15309 (-)
Gene ID: HRGMv2_1535_24_11
Type: TC
Location: 15397 - 16713 (-)
Gene ID: HRGMv2_1535_24_12
Type: TF
Location: 17020 - 17739 (-)
Gene ID: HRGMv2_1535_24_13
Type:
Location: 17826 - 17942 (-)
Gene ID: HRGMv2_1535_24_14
Type: TC
Location: 17964 - 20414 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List