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Cluster: HRGMv2_1535_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1535_7 HRGMv2_1535_7_30 39878 42136 + 1.I.1.1.3
TC HRGMv2_1535_7 HRGMv2_1535_7_31 42511 43023 + 4.A.1.2.5
pfam HRGMv2_1535_7 HRGMv2_1535_7_32 43030 43896 + PRD | PRD | CAT_RBD
TC HRGMv2_1535_7 HRGMv2_1535_7_33 43996 45612 + 4.A.1.1.3
CAZyme HRGMv2_1535_7 HRGMv2_1535_7_34 45616 46998 + GH4
STP HRGMv2_1535_7 HRGMv2_1535_7_35 47256 49088 + Pyr_redox_2
TC HRGMv2_1535_7 HRGMv2_1535_7_36 49082 50893 + 3.D.1.5.1
Gene ID: HRGMv2_1535_7_30
Type: TC
Location: 39878 - 42136 (+)
Gene ID: HRGMv2_1535_7_31
Type: TC
Location: 42511 - 43023 (+)
Gene ID: HRGMv2_1535_7_32
Type: pfam
Location: 43030 - 43896 (+)
Gene ID: HRGMv2_1535_7_33
Type: TC
Location: 43996 - 45612 (+)
Gene ID: HRGMv2_1535_7_34
Type: CAZyme
Location: 45616 - 46998 (+)
Gene ID: HRGMv2_1535_7_35
Type: STP
Location: 47256 - 49088 (+)
Gene ID: HRGMv2_1535_7_36
Type: TC
Location: 49082 - 50893 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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