dbCAN Logo

Cluster: HRGMv2_1535_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1535_1 HRGMv2_1535_1_49 54187 54525 - 4.A.3.1.2
TF HRGMv2_1535_1 HRGMv2_1535_1_50 54740 55744 - LacI
TC HRGMv2_1535_1 HRGMv2_1535_1_51 56102 57874 + 4.A.3.1.1
NULL(UNKNOWN) HRGMv2_1535_1 HRGMv2_1535_1_52 57884 58039 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_1535_1 HRGMv2_1535_1_53 58071 59510 + GH1
TF HRGMv2_1535_1 HRGMv2_1535_1_54 59956 60966 - LacI
TC HRGMv2_1535_1 HRGMv2_1535_1_55 61242 63020 + 4.A.3.1.1
CAZyme HRGMv2_1535_1 HRGMv2_1535_1_56 63097 64518 + GH1
Gene ID: HRGMv2_1535_1_49
Type: TC
Location: 54187 - 54525 (-)
Gene ID: HRGMv2_1535_1_50
Type: TF
Location: 54740 - 55744 (-)
Gene ID: HRGMv2_1535_1_51
Type: TC
Location: 56102 - 57874 (+)
Gene ID: HRGMv2_1535_1_52
Type:
Location: 57884 - 58039 (-)
Gene ID: HRGMv2_1535_1_53
Type: CAZyme
Location: 58071 - 59510 (+)
Gene ID: HRGMv2_1535_1_54
Type: TF
Location: 59956 - 60966 (-)
Gene ID: HRGMv2_1535_1_55
Type: TC
Location: 61242 - 63020 (+)
Gene ID: HRGMv2_1535_1_56
Type: CAZyme
Location: 63097 - 64518 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List