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Cluster: HRGMv2_1534_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1534_12 HRGMv2_1534_12_8 6234 8573 - 3.A.3.5.15
TC HRGMv2_1534_12 HRGMv2_1534_12_9 9133 11343 + 1.I.1.1.3
NULL(UNKNOWN) HRGMv2_1534_12 HRGMv2_1534_12_10 12170 12358 - NULL(UNKNOWN)
[View Structural Homologs]
STP HRGMv2_1534_12 HRGMv2_1534_12_11 12518 12760 + Fer4 | Fer4
TC HRGMv2_1534_12 HRGMv2_1534_12_12 13104 13616 + 4.A.1.2.5
pfam HRGMv2_1534_12 HRGMv2_1534_12_13 13623 14489 + PRD | PRD | CAT_RBD
TC HRGMv2_1534_12 HRGMv2_1534_12_14 14589 16205 + 4.A.1.1.3
CAZyme HRGMv2_1534_12 HRGMv2_1534_12_15 16209 17591 + GH4
Gene ID: HRGMv2_1534_12_8
Type: TC
Location: 6234 - 8573 (-)
Gene ID: HRGMv2_1534_12_9
Type: TC
Location: 9133 - 11343 (+)
Gene ID: HRGMv2_1534_12_10
Type:
Location: 12170 - 12358 (-)
Gene ID: HRGMv2_1534_12_11
Type: STP
Location: 12518 - 12760 (+)
Gene ID: HRGMv2_1534_12_12
Type: TC
Location: 13104 - 13616 (+)
Gene ID: HRGMv2_1534_12_13
Type: pfam
Location: 13623 - 14489 (+)
Gene ID: HRGMv2_1534_12_14
Type: TC
Location: 14589 - 16205 (+)
Gene ID: HRGMv2_1534_12_15
Type: CAZyme
Location: 16209 - 17591 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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