dbCAN Logo

Cluster: HRGMv2_1533_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1533_21 HRGMv2_1533_21_7 8130 9635 + GH77
CAZyme HRGMv2_1533_21 HRGMv2_1533_21_8 9764 12031 + GT35
TC HRGMv2_1533_21 HRGMv2_1533_21_9 12487 13686 - 3.A.1.1.22
TC HRGMv2_1533_21 HRGMv2_1533_21_10 13755 14594 - 3.A.1.1.45
TC HRGMv2_1533_21 HRGMv2_1533_21_11 14594 15448 - 3.A.1.1.45
TC HRGMv2_1533_21 HRGMv2_1533_21_12 15536 16852 - 3.A.1.1.45
TF HRGMv2_1533_21 HRGMv2_1533_21_13 17159 17878 - GntR
NULL(UNKNOWN) HRGMv2_1533_21 HRGMv2_1533_21_14 17962 18081 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1533_21 HRGMv2_1533_21_15 18103 20553 + 4.A.1.1.8
Gene ID: HRGMv2_1533_21_7
Type: CAZyme
Location: 8130 - 9635 (+)
Gene ID: HRGMv2_1533_21_8
Type: CAZyme
Location: 9764 - 12031 (+)
Gene ID: HRGMv2_1533_21_9
Type: TC
Location: 12487 - 13686 (-)
Gene ID: HRGMv2_1533_21_10
Type: TC
Location: 13755 - 14594 (-)
Gene ID: HRGMv2_1533_21_11
Type: TC
Location: 14594 - 15448 (-)
Gene ID: HRGMv2_1533_21_12
Type: TC
Location: 15536 - 16852 (-)
Gene ID: HRGMv2_1533_21_13
Type: TF
Location: 17159 - 17878 (-)
Gene ID: HRGMv2_1533_21_14
Type:
Location: 17962 - 18081 (-)
Gene ID: HRGMv2_1533_21_15
Type: TC
Location: 18103 - 20553 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List