dbCAN Logo

Cluster: HRGMv2_1532_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1532_22 HRGMv2_1532_22_7 9215 10720 + GH77
CAZyme HRGMv2_1532_22 HRGMv2_1532_22_8 10849 13116 + GT35
TC HRGMv2_1532_22 HRGMv2_1532_22_9 13573 14772 - 3.A.1.1.22
TC HRGMv2_1532_22 HRGMv2_1532_22_10 14841 15680 - 3.A.1.1.45
TC HRGMv2_1532_22 HRGMv2_1532_22_11 15680 16534 - 3.A.1.1.45
TC HRGMv2_1532_22 HRGMv2_1532_22_12 16622 17938 - 3.A.1.1.45
TF HRGMv2_1532_22 HRGMv2_1532_22_13 18245 18964 - GntR
NULL(UNKNOWN) HRGMv2_1532_22 HRGMv2_1532_22_14 19048 19167 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1532_22 HRGMv2_1532_22_15 19189 21639 + 4.A.1.1.8
Gene ID: HRGMv2_1532_22_7
Type: CAZyme
Location: 9215 - 10720 (+)
Gene ID: HRGMv2_1532_22_8
Type: CAZyme
Location: 10849 - 13116 (+)
Gene ID: HRGMv2_1532_22_9
Type: TC
Location: 13573 - 14772 (-)
Gene ID: HRGMv2_1532_22_10
Type: TC
Location: 14841 - 15680 (-)
Gene ID: HRGMv2_1532_22_11
Type: TC
Location: 15680 - 16534 (-)
Gene ID: HRGMv2_1532_22_12
Type: TC
Location: 16622 - 17938 (-)
Gene ID: HRGMv2_1532_22_13
Type: TF
Location: 18245 - 18964 (-)
Gene ID: HRGMv2_1532_22_14
Type:
Location: 19048 - 19167 (-)
Gene ID: HRGMv2_1532_22_15
Type: TC
Location: 19189 - 21639 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List