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Cluster: HRGMv2_1531_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1531_20 HRGMv2_1531_20_5 6575 8257 + 2.A.66.4.4
pfam HRGMv2_1531_20 HRGMv2_1531_20_6 8264 10204 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1531_20 HRGMv2_1531_20_7 10569 12182 + 3.A.1.5.27
TC HRGMv2_1531_20 HRGMv2_1531_20_8 12340 13296 + 3.A.1.5.38
TC HRGMv2_1531_20 HRGMv2_1531_20_9 13300 15315 + 3.A.1.5.25
TC HRGMv2_1531_20 HRGMv2_1531_20_10 15316 16143 + 3.A.1.5.27
CAZyme HRGMv2_1531_20 HRGMv2_1531_20_11 16275 17201 + CE7
Gene ID: HRGMv2_1531_20_5
Type: TC
Location: 6575 - 8257 (+)
Gene ID: HRGMv2_1531_20_6
Type: pfam
Location: 8264 - 10204 (+)
Gene ID: HRGMv2_1531_20_7
Type: TC
Location: 10569 - 12182 (+)
Gene ID: HRGMv2_1531_20_8
Type: TC
Location: 12340 - 13296 (+)
Gene ID: HRGMv2_1531_20_9
Type: TC
Location: 13300 - 15315 (+)
Gene ID: HRGMv2_1531_20_10
Type: TC
Location: 15316 - 16143 (+)
Gene ID: HRGMv2_1531_20_11
Type: CAZyme
Location: 16275 - 17201 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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