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Cluster: HRGMv2_1531_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1531_11 HRGMv2_1531_11_2 493 1998 + GH77
CAZyme HRGMv2_1531_11 HRGMv2_1531_11_3 2128 4395 + GT35
TC HRGMv2_1531_11 HRGMv2_1531_11_4 4851 6047 - 3.A.1.1.22
TC HRGMv2_1531_11 HRGMv2_1531_11_5 6116 6955 - 3.A.1.1.45
TC HRGMv2_1531_11 HRGMv2_1531_11_6 6955 7809 - 3.A.1.1.45
TC HRGMv2_1531_11 HRGMv2_1531_11_7 7897 9213 - 3.A.1.1.45
TF HRGMv2_1531_11 HRGMv2_1531_11_8 9520 10239 - GntR
TC HRGMv2_1531_11 HRGMv2_1531_11_9 10464 12914 + 4.A.1.1.8
Gene ID: HRGMv2_1531_11_2
Type: CAZyme
Location: 493 - 1998 (+)
Gene ID: HRGMv2_1531_11_3
Type: CAZyme
Location: 2128 - 4395 (+)
Gene ID: HRGMv2_1531_11_4
Type: TC
Location: 4851 - 6047 (-)
Gene ID: HRGMv2_1531_11_5
Type: TC
Location: 6116 - 6955 (-)
Gene ID: HRGMv2_1531_11_6
Type: TC
Location: 6955 - 7809 (-)
Gene ID: HRGMv2_1531_11_7
Type: TC
Location: 7897 - 9213 (-)
Gene ID: HRGMv2_1531_11_8
Type: TF
Location: 9520 - 10239 (-)
Gene ID: HRGMv2_1531_11_9
Type: TC
Location: 10464 - 12914 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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