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Cluster: HRGMv2_1530_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1530_9 HRGMv2_1530_9_42 46423 48762 - 3.A.3.5.15
STP HRGMv2_1530_9 HRGMv2_1530_9_43 49174 51258 - Pkinase
STP HRGMv2_1530_9 HRGMv2_1530_9_44 51437 52399 - FHA
TC HRGMv2_1530_9 HRGMv2_1530_9_45 52998 55247 + 1.I.1.1.3
STP HRGMv2_1530_9 HRGMv2_1530_9_46 55866 56627 + Fer4
TC HRGMv2_1530_9 HRGMv2_1530_9_47 56909 57421 + 4.A.1.2.5
pfam HRGMv2_1530_9 HRGMv2_1530_9_48 57428 58294 + PRD | PRD | CAT_RBD
TC HRGMv2_1530_9 HRGMv2_1530_9_49 58394 60010 + 4.A.1.1.3
CAZyme HRGMv2_1530_9 HRGMv2_1530_9_50 60014 61396 + GH4
STP HRGMv2_1530_9 HRGMv2_1530_9_51 61653 63485 + Pyr_redox_2
TC HRGMv2_1530_9 HRGMv2_1530_9_52 63479 65290 + 3.D.1.5.1
NULL(UNKNOWN) HRGMv2_1530_9 HRGMv2_1530_9_53 65293 66348 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1530_9 HRGMv2_1530_9_54 66352 67728 + 3.A.1.17.10
Gene ID: HRGMv2_1530_9_42
Type: TC
Location: 46423 - 48762 (-)
Gene ID: HRGMv2_1530_9_43
Type: STP
Location: 49174 - 51258 (-)
Gene ID: HRGMv2_1530_9_44
Type: STP
Location: 51437 - 52399 (-)
Gene ID: HRGMv2_1530_9_45
Type: TC
Location: 52998 - 55247 (+)
Gene ID: HRGMv2_1530_9_46
Type: STP
Location: 55866 - 56627 (+)
Gene ID: HRGMv2_1530_9_47
Type: TC
Location: 56909 - 57421 (+)
Gene ID: HRGMv2_1530_9_48
Type: pfam
Location: 57428 - 58294 (+)
Gene ID: HRGMv2_1530_9_49
Type: TC
Location: 58394 - 60010 (+)
Gene ID: HRGMv2_1530_9_50
Type: CAZyme
Location: 60014 - 61396 (+)
Gene ID: HRGMv2_1530_9_51
Type: STP
Location: 61653 - 63485 (+)
Gene ID: HRGMv2_1530_9_52
Type: TC
Location: 63479 - 65290 (+)
Gene ID: HRGMv2_1530_9_53
Type:
Location: 65293 - 66348 (+)
Gene ID: HRGMv2_1530_9_54
Type: TC
Location: 66352 - 67728 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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