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Cluster: HRGMv2_1530_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1530_23 HRGMv2_1530_23_6 8004 9509 + GH77
CAZyme HRGMv2_1530_23 HRGMv2_1530_23_7 9638 11905 + GT35
TC HRGMv2_1530_23 HRGMv2_1530_23_8 12362 13561 - 3.A.1.1.22
TC HRGMv2_1530_23 HRGMv2_1530_23_9 13630 14469 - 3.A.1.1.45
TC HRGMv2_1530_23 HRGMv2_1530_23_10 14469 15323 - 3.A.1.1.45
TC HRGMv2_1530_23 HRGMv2_1530_23_11 15411 16727 - 3.A.1.1.45
TF HRGMv2_1530_23 HRGMv2_1530_23_12 17034 17753 - GntR
NULL(UNKNOWN) HRGMv2_1530_23 HRGMv2_1530_23_13 17840 17956 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1530_23 HRGMv2_1530_23_14 17978 20428 + 4.A.1.1.8
Gene ID: HRGMv2_1530_23_6
Type: CAZyme
Location: 8004 - 9509 (+)
Gene ID: HRGMv2_1530_23_7
Type: CAZyme
Location: 9638 - 11905 (+)
Gene ID: HRGMv2_1530_23_8
Type: TC
Location: 12362 - 13561 (-)
Gene ID: HRGMv2_1530_23_9
Type: TC
Location: 13630 - 14469 (-)
Gene ID: HRGMv2_1530_23_10
Type: TC
Location: 14469 - 15323 (-)
Gene ID: HRGMv2_1530_23_11
Type: TC
Location: 15411 - 16727 (-)
Gene ID: HRGMv2_1530_23_12
Type: TF
Location: 17034 - 17753 (-)
Gene ID: HRGMv2_1530_23_13
Type:
Location: 17840 - 17956 (-)
Gene ID: HRGMv2_1530_23_14
Type: TC
Location: 17978 - 20428 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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