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Cluster: HRGMv2_1530_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1530_20 HRGMv2_1530_20_10 13623 15305 + 2.A.66.4.4
pfam HRGMv2_1530_20 HRGMv2_1530_20_11 15312 17264 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1530_20 HRGMv2_1530_20_12 17618 19231 + 3.A.1.5.27
TC HRGMv2_1530_20 HRGMv2_1530_20_13 19389 20345 + 3.A.1.5.38
TC HRGMv2_1530_20 HRGMv2_1530_20_14 20349 22364 + 3.A.1.5.25
TC HRGMv2_1530_20 HRGMv2_1530_20_15 22365 23192 + 3.A.1.5.27
CAZyme HRGMv2_1530_20 HRGMv2_1530_20_16 23366 24250 + CE7
Gene ID: HRGMv2_1530_20_10
Type: TC
Location: 13623 - 15305 (+)
Gene ID: HRGMv2_1530_20_11
Type: pfam
Location: 15312 - 17264 (+)
Gene ID: HRGMv2_1530_20_12
Type: TC
Location: 17618 - 19231 (+)
Gene ID: HRGMv2_1530_20_13
Type: TC
Location: 19389 - 20345 (+)
Gene ID: HRGMv2_1530_20_14
Type: TC
Location: 20349 - 22364 (+)
Gene ID: HRGMv2_1530_20_15
Type: TC
Location: 22365 - 23192 (+)
Gene ID: HRGMv2_1530_20_16
Type: CAZyme
Location: 23366 - 24250 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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