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Cluster: HRGMv2_1528_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1528_14 HRGMv2_1528_14_11 10073 10999 - CE7
TC HRGMv2_1528_14 HRGMv2_1528_14_12 11131 11958 - 3.A.1.5.27
TC HRGMv2_1528_14 HRGMv2_1528_14_13 11959 13974 - 3.A.1.5.25
TC HRGMv2_1528_14 HRGMv2_1528_14_14 13978 14934 - 3.A.1.5.38
TC HRGMv2_1528_14 HRGMv2_1528_14_15 15092 16705 - 3.A.1.5.27
pfam HRGMv2_1528_14 HRGMv2_1528_14_16 17070 19010 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1528_14 HRGMv2_1528_14_17 19017 20699 - 2.A.66.4.4
Gene ID: HRGMv2_1528_14_11
Type: CAZyme
Location: 10073 - 10999 (-)
Gene ID: HRGMv2_1528_14_12
Type: TC
Location: 11131 - 11958 (-)
Gene ID: HRGMv2_1528_14_13
Type: TC
Location: 11959 - 13974 (-)
Gene ID: HRGMv2_1528_14_14
Type: TC
Location: 13978 - 14934 (-)
Gene ID: HRGMv2_1528_14_15
Type: TC
Location: 15092 - 16705 (-)
Gene ID: HRGMv2_1528_14_16
Type: pfam
Location: 17070 - 19010 (-)
Gene ID: HRGMv2_1528_14_17
Type: TC
Location: 19017 - 20699 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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